The answer is no. Consider an integral nodal curve Y over an algebraically closed field, normalize the node and remove one of the two points lying over the node. Then you get a morphisme f:XtoY which is bijective (hence homeomorphic), separated and of finite type, and the fibers are just (even reduced) points. But f is not proper (otherwise it would be finite and birational hence coincides with the normalization map).
In the positive direction, you can look at EGA, IV.15.7.10.
[Add] There is an elementary way to see that f is not proper just using the definition. Let Y′toY be the normalization of Y. So X is Y′ minus one closed point y0. It is enough to show that the base change of f to XtimesY′toYtimesY′ is not closed. Consider the closed subset
Delta=leftlbrace(x,x)midxinXrightrbracesubsetXtimesY′.
Its image by fY′:XtimesY′toYtimesY′ is leftlbrace(f(x),x)midxinXrightrbrace which is the graph of Y′toY minus one point (f(y0),y0). So f is not universally closed, thus not proper.
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